Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ssr1Q9CY50 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.58■□□□□ 0.41
Ssr1Q9CY50 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssr1Q9CY50 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Gm21814-202ENSMUST00000203277 873 ntBASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssr1Q9CY50 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.56■□□□□ 0.4
Ssr1Q9CY50 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssr1Q9CY50 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssr1Q9CY50 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms