Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh4Q99MT2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.8■□□□□ 0.12
Msh4Q99MT2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.8■□□□□ 0.12
Msh4Q99MT2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Gm29518-201ENSMUST00000190858 372 ntBASIC15.8■□□□□ 0.12
Msh4Q99MT2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh4Q99MT2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.79■□□□□ 0.12
Msh4Q99MT2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Phf7-203ENSMUST00000226565 1971 ntBASIC15.79■□□□□ 0.12
Msh4Q99MT2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Gm17808-201ENSMUST00000200859 894 ntBASIC15.79■□□□□ 0.12
Msh4Q99MT2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh4Q99MT2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.78■□□□□ 0.12
Msh4Q99MT2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Msh4Q99MT2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms