Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx6-1Q99MA9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx6-1Q99MA9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx6-1Q99MA9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx6-1Q99MA9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Gm11025-201ENSMUST00000140773 466 ntBASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.11■□□□□ 0.01
Nkx6-1Q99MA9 Gm5186-201ENSMUST00000218781 920 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms