Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Thumpd1Q99J36 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Thumpd1Q99J36 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Gm13186-201ENSMUST00000118031 316 ntBASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Trmt13-210ENSMUST00000198454 880 ntBASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Gm7791-201ENSMUST00000219066 539 ntBASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Thumpd1Q99J36 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Thumpd1Q99J36 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Gm18115-201ENSMUST00000221209 621 ntBASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Thumpd1Q99J36 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Thumpd1Q99J36 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms