Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Gm18115-201ENSMUST00000221209 621 ntBASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Gm7213-201ENSMUST00000215977 950 ntBASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb4Q91XZ6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb4Q91XZ6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb4Q91XZ6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Gm10566-201ENSMUST00000086739 996 ntBASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb4Q91XZ6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb4Q91XZ6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms