Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Gm27397-201ENSMUST00000184997 107 ntBASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.11■□□□□ 0.17
Pcdhga6Q91XY2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm23935-201ENSMUST00000102303 57 ntBASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm24270-201ENSMUST00000102326 57 ntBASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm24245-201ENSMUST00000157318 57 ntBASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm24513-201ENSMUST00000174964 138 ntBASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga6Q91XY2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga6Q91XY2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga6Q91XY2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga6Q91XY2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhga6Q91XY2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga6Q91XY2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms