Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Gm18421-201ENSMUST00000204122 625 ntBASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc5Q91XW9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc5Q91XW9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Gm13312-201ENSMUST00000119631 718 ntBASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc5Q91XW9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc5Q91XW9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgc5Q91XW9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Gm12350-201ENSMUST00000121208 462 ntBASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Gm8000-201ENSMUST00000188378 592 ntBASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Gm29707-201ENSMUST00000196325 491 ntBASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Gm5364-201ENSMUST00000216789 889 ntBASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.39■□□□□ 0.53
Pcdhgc5Q91XW9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms