Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb17Q91VD8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Ank2-226ENSMUST00000189368 339 ntBASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb17Q91VD8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Gm13312-201ENSMUST00000119631 718 ntBASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Gm43066-201ENSMUST00000199589 1260 ntBASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb17Q91VD8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Gm14126-201ENSMUST00000122345 395 ntBASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb17Q91VD8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb17Q91VD8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms