Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.2■□□□□ 0.34
TraipQ8VIG6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Mir5131-201ENSMUST00000175426 93 ntBASIC17.2■□□□□ 0.34
TraipQ8VIG6 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.2■□□□□ 0.34
TraipQ8VIG6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.2■□□□□ 0.34
TraipQ8VIG6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Gm1401-201ENSMUST00000122048 772 ntBASIC17.19■□□□□ 0.34
TraipQ8VIG6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.19■□□□□ 0.34
TraipQ8VIG6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TraipQ8VIG6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TraipQ8VIG6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.18■□□□□ 0.34
TraipQ8VIG6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TraipQ8VIG6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.17■□□□□ 0.34
TraipQ8VIG6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TraipQ8VIG6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.16■□□□□ 0.34
TraipQ8VIG6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 AV026068-213ENSMUST00000223675 1171 ntBASIC17.16■□□□□ 0.34
TraipQ8VIG6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TraipQ8VIG6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TraipQ8VIG6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.15■□□□□ 0.34
TraipQ8VIG6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms