Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Gm37025-201ENSMUST00000195159 829 ntBASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh18Q8VHR0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh18Q8VHR0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.64■□□□□ 0.1
Pcdh18Q8VHR0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdh18Q8VHR0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Gm13168-201ENSMUST00000121771 632 ntBASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Pcdh18Q8VHR0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh18Q8VHR0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Gm17661-201ENSMUST00000170317 270 ntBASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh18Q8VHR0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms