Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpa1Q8VEE4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpa1Q8VEE4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Rpa1Q8VEE4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpa1Q8VEE4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpa1Q8VEE4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Rpa1Q8VEE4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms