Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndc1Q8VCB1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Gm27459-201ENSMUST00000184860 107 ntBASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Gm43347-201ENSMUST00000200226 580 ntBASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndc1Q8VCB1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndc1Q8VCB1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndc1Q8VCB1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndc1Q8VCB1 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.27■□□□□ 0.03
Ndc1Q8VCB1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndc1Q8VCB1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Gm44430-201ENSMUST00000203376 995 ntBASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndc1Q8VCB1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Gm13312-201ENSMUST00000119631 718 ntBASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ndc1Q8VCB1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ndc1Q8VCB1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms