Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm45453-201ENSMUST00000211758 853 ntBASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cacnb1Q8R3Z5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Gm15933-201ENSMUST00000117215 616 ntBASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Gm11336-201ENSMUST00000118168 334 ntBASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacnb1Q8R3Z5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gm5656-201ENSMUST00000171020 1096 ntBASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gm45909-201ENSMUST00000212413 1031 ntBASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cacnb1Q8R3Z5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cacnb1Q8R3Z5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cacnb1Q8R3Z5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Gm13216-201ENSMUST00000117145 591 ntBASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Gm44450-201ENSMUST00000199528 114 ntBASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cacnb1Q8R3Z5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Mir669l-201ENSMUST00000103771 98 ntBASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Gm37722-201ENSMUST00000193757 208 ntBASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Gm37845-201ENSMUST00000194977 355 ntBASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 Gm18115-201ENSMUST00000221209 621 ntBASIC18.32■□□□□ 0.52
Cacnb1Q8R3Z5 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms