Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nudcd3Q8R1N4 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.24■□□□□ 0.19
Nudcd3Q8R1N4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nudcd3Q8R1N4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Gm5643-201ENSMUST00000117081 966 ntBASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Actl10-202ENSMUST00000226583 1501 ntBASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nudcd3Q8R1N4 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nudcd3Q8R1N4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
Nudcd3Q8R1N4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms