Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Gm27741-201ENSMUST00000185060 237 ntBASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Birc2-201ENSMUST00000054878 378 ntBASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpp40Q8R1F9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Gm12644-201ENSMUST00000119935 606 ntBASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpp40Q8R1F9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp40Q8R1F9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp40Q8R1F9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp40Q8R1F9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp40Q8R1F9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpp40Q8R1F9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpp40Q8R1F9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpp40Q8R1F9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Gm27459-201ENSMUST00000184860 107 ntBASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpp40Q8R1F9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Rpp40Q8R1F9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms