Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lin28aQ8K3Y3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gm13312-201ENSMUST00000119631 718 ntBASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lin28aQ8K3Y3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lin28aQ8K3Y3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Rprl3-201ENSMUST00000157400 290 ntBASIC15.1■□□□□ 0.01
Lin28aQ8K3Y3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms