Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Gm6550-201ENSMUST00000187574 993 ntBASIC16.2■□□□□ 0.18
Scara5Q8K299 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.2■□□□□ 0.18
Scara5Q8K299 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.2■□□□□ 0.18
Scara5Q8K299 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scara5Q8K299 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.2■□□□□ 0.18
Scara5Q8K299 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scara5Q8K299 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scara5Q8K299 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scara5Q8K299 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scara5Q8K299 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scara5Q8K299 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scara5Q8K299 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Gm27628-201ENSMUST00000184911 107 ntBASIC16.19■□□□□ 0.18
Scara5Q8K299 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.19■□□□□ 0.18
Scara5Q8K299 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scara5Q8K299 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.19■□□□□ 0.18
Scara5Q8K299 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scara5Q8K299 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.19■□□□□ 0.18
Scara5Q8K299 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
Scara5Q8K299 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.18■□□□□ 0.18
Scara5Q8K299 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Gm13036-201ENSMUST00000117799 748 ntBASIC16.18■□□□□ 0.18
Scara5Q8K299 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.18■□□□□ 0.18
Scara5Q8K299 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Scara5Q8K299 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Scara5Q8K299 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scara5Q8K299 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.17■□□□□ 0.18
Scara5Q8K299 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scara5Q8K299 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scara5Q8K299 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scara5Q8K299 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.17■□□□□ 0.18
Scara5Q8K299 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.17■□□□□ 0.18
Scara5Q8K299 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.17■□□□□ 0.18
Scara5Q8K299 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Scara5Q8K299 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.16■□□□□ 0.18
Scara5Q8K299 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.16■□□□□ 0.18
Scara5Q8K299 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.16■□□□□ 0.18
Scara5Q8K299 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.16■□□□□ 0.18
Scara5Q8K299 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.16■□□□□ 0.18
Scara5Q8K299 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Scara5Q8K299 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scara5Q8K299 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scara5Q8K299 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scara5Q8K299 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scara5Q8K299 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Gm11780-201ENSMUST00000136880 516 ntBASIC16.15■□□□□ 0.18
Scara5Q8K299 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scara5Q8K299 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scara5Q8K299 Gm10576-201ENSMUST00000191927 825 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms