Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gm25016-201ENSMUST00000158399 131 ntBASIC15.5■□□□□ 0.07
CroccQ8CJ40 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.5■□□□□ 0.07
CroccQ8CJ40 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CroccQ8CJ40 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CroccQ8CJ40 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.48■□□□□ 0.07
CroccQ8CJ40 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CroccQ8CJ40 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.47■□□□□ 0.07
CroccQ8CJ40 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Olfr129-201ENSMUST00000122318 993 ntBASIC15.47■□□□□ 0.07
CroccQ8CJ40 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.47■□□□□ 0.07
CroccQ8CJ40 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CroccQ8CJ40 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms