Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1aQ8CIG0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Gm2651-201ENSMUST00000203560 838 ntBASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1aQ8CIG0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Mir5131-201ENSMUST00000175426 93 ntBASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1aQ8CIG0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1aQ8CIG0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1aQ8CIG0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Gm7230-201ENSMUST00000173026 815 ntBASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 AW822252-206ENSMUST00000208904 237 ntBASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Depdc1aQ8CIG0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms