Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb7Q8CDY9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb7Q8CDY9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb7Q8CDY9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdhb7Q8CDY9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms