Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Aph1bQ8C7N7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Aph1bQ8C7N7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Aph1bQ8C7N7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Aph1bQ8C7N7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
Aph1bQ8C7N7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Aph1bQ8C7N7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Aph1bQ8C7N7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Aph1bQ8C7N7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Aph1bQ8C7N7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Aph1bQ8C7N7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms