Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tsen54Q8C2A2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.61□□□□□ -0.23
Tsen54Q8C2A2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tsen54Q8C2A2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tsen54Q8C2A2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tsen54Q8C2A2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tsen54Q8C2A2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tsen54Q8C2A2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Tsen54Q8C2A2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Gm10698-201ENSMUST00000182663 604 ntBASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.58□□□□□ -0.24
Tsen54Q8C2A2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms