Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps9d1Q8C190 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Gm9987-201ENSMUST00000069768 567 ntBASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps9d1Q8C190 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps9d1Q8C190 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Vps9d1Q8C190 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Vps9d1Q8C190 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps9d1Q8C190 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Gm27463-201ENSMUST00000183569 57 ntBASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Gm21814-202ENSMUST00000203277 873 ntBASIC15.2■□□□□ 0.02
Vps9d1Q8C190 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps9d1Q8C190 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Gm43799-201ENSMUST00000201845 579 ntBASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Gm7791-201ENSMUST00000219066 539 ntBASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps9d1Q8C190 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps9d1Q8C190 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms