Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.67■□□□□ 0.26
Suds3Q8BR65 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.67■□□□□ 0.26
Suds3Q8BR65 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Suds3Q8BR65 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Gm21559-201ENSMUST00000220638 855 ntBASIC16.66■□□□□ 0.26
Suds3Q8BR65 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Gm8587-201ENSMUST00000076538 843 ntBASIC16.66■□□□□ 0.26
Suds3Q8BR65 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Suds3Q8BR65 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Suds3Q8BR65 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.65■□□□□ 0.26
Suds3Q8BR65 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.65■□□□□ 0.26
Suds3Q8BR65 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Suds3Q8BR65 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Suds3Q8BR65 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Suds3Q8BR65 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Suds3Q8BR65 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms