Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col16a1Q8BLX7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 AA543401-201ENSMUST00000164248 1269 ntBASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Gm45747-201ENSMUST00000212203 999 ntBASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Rarb-207ENSMUST00000225921 2756 ntBASIC21.15■□□□□ 0.98
Col16a1Q8BLX7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC21.14■□□□□ 0.98
Col16a1Q8BLX7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col16a1Q8BLX7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Gm15427-201ENSMUST00000117288 531 ntBASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Gm12892-201ENSMUST00000117367 1146 ntBASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Gm15358-201ENSMUST00000119249 520 ntBASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Gm5177-201ENSMUST00000183092 997 ntBASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col16a1Q8BLX7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.12■□□□□ 0.97
Col16a1Q8BLX7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Gm38318-201ENSMUST00000195769 1706 ntBASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col16a1Q8BLX7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Gm5312-201ENSMUST00000203728 547 ntBASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col16a1Q8BLX7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms