Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp1Q8BJQ2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp1Q8BJQ2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp1Q8BJQ2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Gm1401-201ENSMUST00000122048 772 ntBASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp1Q8BJQ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp1Q8BJQ2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp1Q8BJQ2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp1Q8BJQ2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp1Q8BJQ2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms