Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm15165-201ENSMUST00000118140 502 ntBASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Gm12260-201ENSMUST00000122447 411 ntBASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf40bQ80W14 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf40bQ80W14 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Prpf40bQ80W14 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf40bQ80W14 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf40bQ80W14 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf40bQ80W14 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm14822-201ENSMUST00000122247 291 ntBASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm24513-201ENSMUST00000174964 138 ntBASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm27397-201ENSMUST00000184997 107 ntBASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf40bQ80W14 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf40bQ80W14 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms