Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Casc1Q6TDU8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc1Q6TDU8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Gm6659-201ENSMUST00000174752 547 ntBASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Casc1Q6TDU8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.35■□□□□ 0.69
Casc1Q6TDU8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.35■□□□□ 0.69
Casc1Q6TDU8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Gm27000-201ENSMUST00000182943 842 ntBASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc1Q6TDU8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Casc1Q6TDU8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Casc1Q6TDU8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms