Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dhx40Q6PE54 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Gm11539-201ENSMUST00000119837 557 ntBASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Gm21814-202ENSMUST00000203277 873 ntBASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Gm18421-201ENSMUST00000204122 625 ntBASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dhx40Q6PE54 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Dhx40Q6PE54 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Mir5122-201ENSMUST00000175004 89 ntBASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Dhx40Q6PE54 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18■□□□□ 0.47
Dhx40Q6PE54 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18■□□□□ 0.47
Dhx40Q6PE54 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18■□□□□ 0.47
Dhx40Q6PE54 Gm7370-201ENSMUST00000219471 767 ntBASIC18■□□□□ 0.47
Dhx40Q6PE54 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Dhx40Q6PE54 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Dhx40Q6PE54 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dhx40Q6PE54 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Dhx40Q6PE54 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Dhx40Q6PE54 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms