Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.06■□□□□ 0.64
Ctr9Q62018 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.06■□□□□ 0.64
Ctr9Q62018 Gm7461-201ENSMUST00000058918 827 ntBASIC19.06■□□□□ 0.64
Ctr9Q62018 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Ctr9Q62018 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ctr9Q62018 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.05■□□□□ 0.64
Ctr9Q62018 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Ctr9Q62018 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ctr9Q62018 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ctr9Q62018 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ctr9Q62018 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Ctr9Q62018 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.04■□□□□ 0.64
Ctr9Q62018 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.04■□□□□ 0.64
Ctr9Q62018 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.04■□□□□ 0.64
Ctr9Q62018 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Ctr9Q62018 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ctr9Q62018 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.04■□□□□ 0.64
Ctr9Q62018 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ctr9Q62018 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.03■□□□□ 0.64
Ctr9Q62018 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.03■□□□□ 0.64
Ctr9Q62018 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.03■□□□□ 0.64
Ctr9Q62018 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.03■□□□□ 0.64
Ctr9Q62018 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.03■□□□□ 0.64
Ctr9Q62018 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.03■□□□□ 0.64
Ctr9Q62018 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctr9Q62018 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ctr9Q62018 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.02■□□□□ 0.64
Ctr9Q62018 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.02■□□□□ 0.64
Ctr9Q62018 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctr9Q62018 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms