Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.35■□□□□ 0.21
Six4Q61321 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.35■□□□□ 0.21
Six4Q61321 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Six4Q61321 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Six4Q61321 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Six4Q61321 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.34■□□□□ 0.21
Six4Q61321 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.34■□□□□ 0.21
Six4Q61321 Gm17807-201ENSMUST00000186869 298 ntBASIC16.34■□□□□ 0.21
Six4Q61321 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.34■□□□□ 0.21
Six4Q61321 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Six4Q61321 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Six4Q61321 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.34■□□□□ 0.21
Six4Q61321 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six4Q61321 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six4Q61321 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six4Q61321 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six4Q61321 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Six4Q61321 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six4Q61321 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six4Q61321 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Six4Q61321 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six4Q61321 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six4Q61321 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.33■□□□□ 0.2
Six4Q61321 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.33■□□□□ 0.2
Six4Q61321 Gm10819-201ENSMUST00000099988 561 ntBASIC16.33■□□□□ 0.2
Six4Q61321 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Six4Q61321 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Six4Q61321 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.33■□□□□ 0.2
Six4Q61321 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six4Q61321 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six4Q61321 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.33■□□□□ 0.2
Six4Q61321 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six4Q61321 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Six4Q61321 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Six4Q61321 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Six4Q61321 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.32■□□□□ 0.2
Six4Q61321 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Six4Q61321 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Six4Q61321 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six4Q61321 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Six4Q61321 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six4Q61321 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms