Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cln3Q61124 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.72■□□□□ 0.43
Cln3Q61124 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cln3Q61124 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.71■□□□□ 0.43
Cln3Q61124 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Cln3Q61124 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.71■□□□□ 0.43
Cln3Q61124 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.71■□□□□ 0.43
Cln3Q61124 Mir3113-201ENSMUST00000175478 76 ntBASIC17.71■□□□□ 0.43
Cln3Q61124 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Gm45167-201ENSMUST00000208007 322 ntBASIC17.71■□□□□ 0.43
Cln3Q61124 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.71■□□□□ 0.43
Cln3Q61124 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.71■□□□□ 0.43
Cln3Q61124 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cln3Q61124 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cln3Q61124 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.7■□□□□ 0.42
Cln3Q61124 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Cln3Q61124 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Cln3Q61124 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.7■□□□□ 0.42
Cln3Q61124 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.7■□□□□ 0.42
Cln3Q61124 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.7■□□□□ 0.42
Cln3Q61124 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cln3Q61124 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.7■□□□□ 0.42
Cln3Q61124 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.7■□□□□ 0.42
Cln3Q61124 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
Cln3Q61124 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cln3Q61124 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
Cln3Q61124 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cln3Q61124 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cln3Q61124 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cln3Q61124 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.69■□□□□ 0.42
Cln3Q61124 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.69■□□□□ 0.42
Cln3Q61124 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cln3Q61124 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.69■□□□□ 0.42
Cln3Q61124 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cln3Q61124 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.69■□□□□ 0.42
Cln3Q61124 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Cln3Q61124 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cln3Q61124 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cln3Q61124 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.68■□□□□ 0.42
Cln3Q61124 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cln3Q61124 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cln3Q61124 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
Cln3Q61124 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.68■□□□□ 0.42
Cln3Q61124 Gm4899-201ENSMUST00000178708 719 ntBASIC17.68■□□□□ 0.42
Cln3Q61124 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.68■□□□□ 0.42
Cln3Q61124 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.68■□□□□ 0.42
Cln3Q61124 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.68■□□□□ 0.42
Cln3Q61124 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.68■□□□□ 0.42
Cln3Q61124 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cln3Q61124 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms