Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.44■□□□□ 0.7
Vps54Q5SPW0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Birc2-201ENSMUST00000054878 378 ntBASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vps54Q5SPW0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Gm7153-201ENSMUST00000117092 455 ntBASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Gm12644-201ENSMUST00000119935 606 ntBASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps54Q5SPW0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps54Q5SPW0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps54Q5SPW0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vps54Q5SPW0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps54Q5SPW0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Vps54Q5SPW0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vps54Q5SPW0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps54Q5SPW0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps54Q5SPW0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.39■□□□□ 0.69
Vps54Q5SPW0 Gm27459-201ENSMUST00000184860 107 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms