Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Gm43347-201ENSMUST00000200226 580 ntBASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav2Q5R1I9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Gm44454-201ENSMUST00000198541 138 ntBASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav2Q5R1I9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Gm12644-201ENSMUST00000119935 606 ntBASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Gm34391-201ENSMUST00000203706 907 ntBASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav2Q5R1I9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gm15165-201ENSMUST00000118140 502 ntBASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gm27459-201ENSMUST00000184860 107 ntBASIC12.91□□□□□ -0.34
Trav2Q5R1I9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gm28659-201ENSMUST00000188013 759 ntBASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav2Q5R1I9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav2Q5R1I9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms