Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav5d-4Q5R1F6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5d-4Q5R1F6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5d-4Q5R1F6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5d-4Q5R1F6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav5d-4Q5R1F6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5d-4Q5R1F6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Gm18101-201ENSMUST00000215769 548 ntBASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Gm9987-201ENSMUST00000069768 567 ntBASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5d-4Q5R1F6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms