Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Asic1-205ENSMUST00000228185 1818 ntBASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm18284-201ENSMUST00000172604 624 ntBASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm18958-201ENSMUST00000174258 762 ntBASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Il3ra-202ENSMUST00000223589 738 ntBASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.64□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm18666-201ENSMUST00000190039 958 ntBASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms