Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm4459-201ENSMUST00000118750 468 ntBASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm14494-201ENSMUST00000118786 435 ntBASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm43575-201ENSMUST00000196420 516 ntBASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf43Q5NCP0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gm9727-201ENSMUST00000161387 555 ntBASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gm9172-201ENSMUST00000212092 954 ntBASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rnf43Q5NCP0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf43Q5NCP0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf43Q5NCP0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Gm13036-201ENSMUST00000117799 748 ntBASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Gm12260-201ENSMUST00000122447 411 ntBASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rnf43Q5NCP0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf43Q5NCP0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms