Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1brtQ3UNC9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Gm9959-201ENSMUST00000068277 390 ntBASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1brtQ3UNC9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cks1brtQ3UNC9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.72□□□□□ -0.53
Cks1brtQ3UNC9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms