Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Naf1Q3UMQ8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Naf1Q3UMQ8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.43■□□□□ 0.22
Naf1Q3UMQ8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Naf1Q3UMQ8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Naf1Q3UMQ8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms