Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm4518-201ENSMUST00000182638 718 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col5a2Q3U962 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.14■□□□□ 0.65
Col5a2Q3U962 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Gm15358-201ENSMUST00000119249 520 ntBASIC19.13■□□□□ 0.65
Col5a2Q3U962 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Gm18489-201ENSMUST00000172565 551 ntBASIC19.13■□□□□ 0.65
Col5a2Q3U962 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col5a2Q3U962 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.12■□□□□ 0.65
Col5a2Q3U962 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Gm43474-201ENSMUST00000196415 774 ntBASIC19.12■□□□□ 0.65
Col5a2Q3U962 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.12■□□□□ 0.65
Col5a2Q3U962 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.12■□□□□ 0.65
Col5a2Q3U962 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.12■□□□□ 0.65
Col5a2Q3U962 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Gm23547-201ENSMUST00000158210 271 ntBASIC19.11■□□□□ 0.65
Col5a2Q3U962 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.11■□□□□ 0.65
Col5a2Q3U962 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col5a2Q3U962 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.1■□□□□ 0.65
Col5a2Q3U962 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col5a2Q3U962 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.09■□□□□ 0.65
Col5a2Q3U962 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.09■□□□□ 0.65
Col5a2Q3U962 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col5a2Q3U962 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms