Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3U1D9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3U1D9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.05□□□□□ -0.16
Q3U1D9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.05□□□□□ -0.16
Q3U1D9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.05□□□□□ -0.16
Q3U1D9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.05□□□□□ -0.16
Q3U1D9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3U1D9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3U1D9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3U1D9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3U1D9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Q3U1D9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.04□□□□□ -0.16
Q3U1D9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Q3U1D9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Q3U1D9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.04□□□□□ -0.16
Q3U1D9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Q3U1D9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3U1D9 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.03□□□□□ -0.16
Q3U1D9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q3U1D9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.03□□□□□ -0.16
Q3U1D9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Q3U1D9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.03□□□□□ -0.16
Q3U1D9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.03□□□□□ -0.16
Q3U1D9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3U1D9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Q3U1D9 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.03□□□□□ -0.16
Q3U1D9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Q3U1D9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Q3U1D9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Q3U1D9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Q3U1D9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Q3U1D9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3U1D9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.02□□□□□ -0.17
Q3U1D9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.02□□□□□ -0.17
Q3U1D9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.02□□□□□ -0.17
Q3U1D9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Q3U1D9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3U1D9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms