Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smn1P97801 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smn1P97801 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smn1P97801 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smn1P97801 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smn1P97801 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.93□□□□□ -0.18
Smn1P97801 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.93□□□□□ -0.18
Smn1P97801 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smn1P97801 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.93□□□□□ -0.18
Smn1P97801 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smn1P97801 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.92□□□□□ -0.18
Smn1P97801 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smn1P97801 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smn1P97801 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Gm5643-201ENSMUST00000117081 966 ntBASIC13.92□□□□□ -0.18
Smn1P97801 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.92□□□□□ -0.18
Smn1P97801 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smn1P97801 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smn1P97801 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.92□□□□□ -0.18
Smn1P97801 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smn1P97801 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.92□□□□□ -0.18
Smn1P97801 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.92□□□□□ -0.18
Smn1P97801 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smn1P97801 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Smn1P97801 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Smn1P97801 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smn1P97801 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Smn1P97801 Gm12527-201ENSMUST00000117967 564 ntBASIC13.91□□□□□ -0.18
Smn1P97801 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.91□□□□□ -0.18
Smn1P97801 Gm7791-201ENSMUST00000219066 539 ntBASIC13.91□□□□□ -0.18
Smn1P97801 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smn1P97801 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.91□□□□□ -0.18
Smn1P97801 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smn1P97801 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Smn1P97801 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.9□□□□□ -0.18
Smn1P97801 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smn1P97801 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smn1P97801 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smn1P97801 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.9□□□□□ -0.18
Smn1P97801 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smn1P97801 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms