Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lig3P97386 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.42
Lig3P97386 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lig3P97386 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lig3P97386 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lig3P97386 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.64■□□□□ 0.41
Lig3P97386 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lig3P97386 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lig3P97386 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.64■□□□□ 0.41
Lig3P97386 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lig3P97386 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.64■□□□□ 0.41
Lig3P97386 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.64■□□□□ 0.41
Lig3P97386 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lig3P97386 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.63■□□□□ 0.41
Lig3P97386 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Lig3P97386 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lig3P97386 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lig3P97386 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.63■□□□□ 0.41
Lig3P97386 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lig3P97386 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lig3P97386 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lig3P97386 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lig3P97386 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.62■□□□□ 0.41
Lig3P97386 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.62■□□□□ 0.41
Lig3P97386 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.62■□□□□ 0.41
Lig3P97386 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.62■□□□□ 0.41
Lig3P97386 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lig3P97386 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.62■□□□□ 0.41
Lig3P97386 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.62■□□□□ 0.41
Lig3P97386 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lig3P97386 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.62■□□□□ 0.41
Lig3P97386 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lig3P97386 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lig3P97386 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Lig3P97386 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lig3P97386 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lig3P97386 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.61■□□□□ 0.41
Lig3P97386 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.61■□□□□ 0.41
Lig3P97386 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.61■□□□□ 0.41
Lig3P97386 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lig3P97386 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms