Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.63□□□□□ -0.23
SgcaP82350 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SgcaP82350 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SgcaP82350 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
SgcaP82350 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SgcaP82350 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.63□□□□□ -0.23
SgcaP82350 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcaP82350 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SgcaP82350 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcaP82350 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gm10849-201ENSMUST00000100397 618 ntBASIC13.62□□□□□ -0.23
SgcaP82350 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcaP82350 Gm26571-201ENSMUST00000181399 666 ntBASIC13.62□□□□□ -0.23
SgcaP82350 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.62□□□□□ -0.23
SgcaP82350 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.62□□□□□ -0.23
SgcaP82350 Gm4974-201ENSMUST00000209974 875 ntBASIC13.62□□□□□ -0.23
SgcaP82350 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SgcaP82350 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gm4968-201ENSMUST00000071458 858 ntBASIC13.62□□□□□ -0.23
SgcaP82350 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcaP82350 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SgcaP82350 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.61□□□□□ -0.23
SgcaP82350 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SgcaP82350 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcaP82350 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcaP82350 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SgcaP82350 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcaP82350 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.6□□□□□ -0.23
SgcaP82350 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SgcaP82350 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.6□□□□□ -0.23
SgcaP82350 Gm2559-201ENSMUST00000201323 363 ntBASIC13.6□□□□□ -0.23
SgcaP82350 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.6□□□□□ -0.23
SgcaP82350 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.6□□□□□ -0.23
SgcaP82350 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcaP82350 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms