Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.57■□□□□ 0.24
Ybx1P62960 Gm15467-201ENSMUST00000120582 445 ntBASIC16.57■□□□□ 0.24
Ybx1P62960 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.57■□□□□ 0.24
Ybx1P62960 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ybx1P62960 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Ybx1P62960 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.57■□□□□ 0.24
Ybx1P62960 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Ybx1P62960 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Haglr-201ENSMUST00000100000 2085 ntBASIC16.57■□□□□ 0.24
Ybx1P62960 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ybx1P62960 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Ybx1P62960 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.56■□□□□ 0.24
Ybx1P62960 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ybx1P62960 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.56■□□□□ 0.24
Ybx1P62960 Gm4995-201ENSMUST00000117247 432 ntBASIC16.56■□□□□ 0.24
Ybx1P62960 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.56■□□□□ 0.24
Ybx1P62960 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.56■□□□□ 0.24
Ybx1P62960 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.56■□□□□ 0.24
Ybx1P62960 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Ybx1P62960 Gm6550-201ENSMUST00000187574 993 ntBASIC16.56■□□□□ 0.24
Ybx1P62960 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.56■□□□□ 0.24
Ybx1P62960 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.56■□□□□ 0.24
Ybx1P62960 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ybx1P62960 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ybx1P62960 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.56■□□□□ 0.24
Ybx1P62960 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ybx1P62960 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ybx1P62960 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ybx1P62960 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Gm12260-201ENSMUST00000122447 411 ntBASIC16.55■□□□□ 0.24
Ybx1P62960 Gm12497-201ENSMUST00000138778 237 ntBASIC16.55■□□□□ 0.24
Ybx1P62960 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Gm27628-201ENSMUST00000184911 107 ntBASIC16.55■□□□□ 0.24
Ybx1P62960 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 AV026068-213ENSMUST00000223675 1171 ntBASIC16.55■□□□□ 0.24
Ybx1P62960 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ybx1P62960 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.55■□□□□ 0.24
Ybx1P62960 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.54■□□□□ 0.24
Ybx1P62960 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ybx1P62960 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.54■□□□□ 0.24
Ybx1P62960 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ybx1P62960 Gm36967-201ENSMUST00000193814 266 ntBASIC16.54■□□□□ 0.24
Ybx1P62960 Gm2213-201ENSMUST00000197485 688 ntBASIC16.54■□□□□ 0.24
Ybx1P62960 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.54■□□□□ 0.24
Ybx1P62960 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ybx1P62960 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ybx1P62960 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Ybx1P62960 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ybx1P62960 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ybx1P62960 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ybx1P62960 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.53■□□□□ 0.24
Ybx1P62960 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ybx1P62960 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ybx1P62960 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ybx1P62960 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms