Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atxn1P54254 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.06■□□□□ 0.16
Atxn1P54254 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.06■□□□□ 0.16
Atxn1P54254 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Gm25990-201ENSMUST00000102440 86 ntBASIC16.06■□□□□ 0.16
Atxn1P54254 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.06■□□□□ 0.16
Atxn1P54254 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.06■□□□□ 0.16
Atxn1P54254 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.06■□□□□ 0.16
Atxn1P54254 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Atxn1P54254 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atxn1P54254 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.06■□□□□ 0.16
Atxn1P54254 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atxn1P54254 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atxn1P54254 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Atxn1P54254 Gm13418-201ENSMUST00000119097 944 ntBASIC16.05■□□□□ 0.16
Atxn1P54254 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.05■□□□□ 0.16
Atxn1P54254 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atxn1P54254 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.05■□□□□ 0.16
Atxn1P54254 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.05■□□□□ 0.16
Atxn1P54254 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atxn1P54254 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atxn1P54254 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.04■□□□□ 0.16
Atxn1P54254 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Atxn1P54254 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Atxn1P54254 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Gm25911-201ENSMUST00000157621 56 ntBASIC16.04■□□□□ 0.16
Atxn1P54254 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.04■□□□□ 0.16
Atxn1P54254 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.04■□□□□ 0.16
Atxn1P54254 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Gm10175-201ENSMUST00000086013 645 ntBASIC16.04■□□□□ 0.16
Atxn1P54254 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atxn1P54254 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atxn1P54254 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.04■□□□□ 0.16
Atxn1P54254 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.04■□□□□ 0.16
Atxn1P54254 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atxn1P54254 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.03■□□□□ 0.16
Atxn1P54254 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atxn1P54254 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atxn1P54254 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Atxn1P54254 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Atxn1P54254 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atxn1P54254 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.03■□□□□ 0.16
Atxn1P54254 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.03■□□□□ 0.16
Atxn1P54254 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Atxn1P54254 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.03■□□□□ 0.16
Atxn1P54254 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atxn1P54254 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms