Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Gm5682-201ENSMUST00000173402 505 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm8825-201ENSMUST00000182565 998 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm4518-201ENSMUST00000182638 718 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Mir8117-201ENSMUST00000184773 107 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdx2P43241 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cdx2P43241 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cdx2P43241 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
Cdx2P43241 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.35■□□□□ 0.05
Cdx2P43241 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cdx2P43241 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Cdx2P43241 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdx2P43241 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.34■□□□□ 0.05
Cdx2P43241 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.34■□□□□ 0.05
Cdx2P43241 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.34■□□□□ 0.05
Cdx2P43241 Gm11764-201ENSMUST00000120221 623 ntBASIC15.34■□□□□ 0.05
Cdx2P43241 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.34■□□□□ 0.05
Cdx2P43241 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdx2P43241 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdx2P43241 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdx2P43241 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdx2P43241 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdx2P43241 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdx2P43241 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdx2P43241 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdx2P43241 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdx2P43241 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdx2P43241 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdx2P43241 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.33■□□□□ 0.04
Cdx2P43241 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Cdx2P43241 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdx2P43241 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdx2P43241 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdx2P43241 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.33■□□□□ 0.04
Cdx2P43241 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdx2P43241 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdx2P43241 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cdx2P43241 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdx2P43241 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdx2P43241 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdx2P43241 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms