Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15□□□□□ -0.01
Thbs1P35441 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15□□□□□ -0.01
Thbs1P35441 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Thbs1P35441 Gm18032-201ENSMUST00000222541 538 ntBASIC15□□□□□ -0.01
Thbs1P35441 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Thbs1P35441 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Thbs1P35441 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15□□□□□ -0.01
Thbs1P35441 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Thbs1P35441 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Thbs1P35441 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Thbs1P35441 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Thbs1P35441 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.99□□□□□ -0.01
Thbs1P35441 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Thbs1P35441 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.99□□□□□ -0.01
Thbs1P35441 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.99□□□□□ -0.01
Thbs1P35441 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.99□□□□□ -0.01
Thbs1P35441 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Thbs1P35441 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Thbs1P35441 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Thbs1P35441 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.99□□□□□ -0.01
Thbs1P35441 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Thbs1P35441 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.98□□□□□ -0.01
Thbs1P35441 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.98□□□□□ -0.01
Thbs1P35441 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.98□□□□□ -0.01
Thbs1P35441 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.98□□□□□ -0.01
Thbs1P35441 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Thbs1P35441 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.98□□□□□ -0.01
Thbs1P35441 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Thbs1P35441 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Thbs1P35441 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Thbs1P35441 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.97□□□□□ -0.01
Thbs1P35441 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Thbs1P35441 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.97□□□□□ -0.01
Thbs1P35441 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Thbs1P35441 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Thbs1P35441 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Thbs1P35441 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Thbs1P35441 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Thbs1P35441 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Thbs1P35441 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Thbs1P35441 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Thbs1P35441 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Thbs1P35441 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms