Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nckap1P28660 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.1■□□□□ 0.17
Nckap1P28660 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nckap1P28660 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nckap1P28660 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nckap1P28660 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nckap1P28660 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Nckap1P28660 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nckap1P28660 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Nckap1P28660 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nckap1P28660 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nckap1P28660 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nckap1P28660 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1P28660 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1P28660 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1P28660 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nckap1P28660 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.08■□□□□ 0.16
Nckap1P28660 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nckap1P28660 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Gm36967-201ENSMUST00000193814 266 ntBASIC16.08■□□□□ 0.16
Nckap1P28660 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.08■□□□□ 0.16
Nckap1P28660 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.08■□□□□ 0.16
Nckap1P28660 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nckap1P28660 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.07■□□□□ 0.16
Nckap1P28660 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44357-201ENSMUST00000195897 142 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm19658-201ENSMUST00000196231 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44367-201ENSMUST00000196836 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44350-201ENSMUST00000197197 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44390-201ENSMUST00000197533 144 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44313-201ENSMUST00000198018 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44486-201ENSMUST00000198508 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44314-201ENSMUST00000199263 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44394-201ENSMUST00000199558 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44484-201ENSMUST00000199873 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44466-201ENSMUST00000200264 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm44359-201ENSMUST00000200671 138 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Gm18206-201ENSMUST00000207027 926 ntBASIC16.07■□□□□ 0.16
Nckap1P28660 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.07■□□□□ 0.16
Nckap1P28660 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Nckap1P28660 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Nckap1P28660 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nckap1P28660 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nckap1P28660 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.06■□□□□ 0.16
Nckap1P28660 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms