Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CenpbP27790 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CenpbP27790 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC21.91■■□□□ 1.1
CenpbP27790 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC21.91■■□□□ 1.1
CenpbP27790 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Gm7291-201ENSMUST00000199147 382 ntBASIC21.91■■□□□ 1.1
CenpbP27790 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.91■■□□□ 1.1
CenpbP27790 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Rubie-203ENSMUST00000227803 2430 ntBASIC21.91■■□□□ 1.1
CenpbP27790 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.91■■□□□ 1.1
CenpbP27790 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CenpbP27790 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.9■■□□□ 1.1
CenpbP27790 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.9■■□□□ 1.1
CenpbP27790 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.9■■□□□ 1.1
CenpbP27790 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
CenpbP27790 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CenpbP27790 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC21.9■■□□□ 1.1
CenpbP27790 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CenpbP27790 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CenpbP27790 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CenpbP27790 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CenpbP27790 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CenpbP27790 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CenpbP27790 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CenpbP27790 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CenpbP27790 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.89■■□□□ 1.09
CenpbP27790 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.89■■□□□ 1.09
CenpbP27790 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.89■■□□□ 1.09
CenpbP27790 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CenpbP27790 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC21.89■■□□□ 1.09
CenpbP27790 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CenpbP27790 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CenpbP27790 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CenpbP27790 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.88■■□□□ 1.09
CenpbP27790 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
CenpbP27790 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CenpbP27790 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CenpbP27790 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CenpbP27790 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.87■■□□□ 1.09
CenpbP27790 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.87■■□□□ 1.09
CenpbP27790 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CenpbP27790 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.87■■□□□ 1.09
CenpbP27790 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CenpbP27790 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CenpbP27790 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CenpbP27790 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms